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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935093.1_cds_XP_016481028.1_72407
CDS Infomation

[gene=LOC107802101] [db_xref=GeneID:107802101] [protein=pectin acetylesterase 12-like isoform X1] [protein_id=XP_016481028.1] [location=complement(join(63994..64101,64210..64355,64437..64542,64674..64751,64840..64893,65250..65310,65419..65543,65619..65705,66621..66694,66786..66915,67381..67463,68469..68670))] [gbkey=CDS]
Sequence

ATGGCGAAGGTTTTCATGTGGTTTTTGGGTGTTATTTTTGTGCTTAGCAAATTAGTAGAT
TCTTATGAATTTGAAGAATTCTTTTTCAATAAAACCGAAGGGGTATTCTTGGAGAGTGTA
TATGAAGCTGCTGCAGCTGGTGGTCCAACTCCTCTTATGGTTGGTCTTACACTCATTCAT
GGTGCTGGTGCTAGAGGAGCTGTGTGTTTGGATGGAACACTGCCAGGTTACCACATCCAT
CGAGGTTATGGTTCTGGGGCAAACAGTTGGCTCGTTCAATTGGAGGGTGGAGGATGGTGT
AACAATATTAGAAGTTGCGTTTATCGCAAAAAGACAAGACGGGGATCATCGAATTACATG
GAAAAACAGATTCCGTTTACTGGGATTTTGAGTAACAAGGCCGAAGAAAATCCAGATTTT
TATAACTGGAATAGAGTAAAAGTTCGCTACTGTGATGGCGCCTCCTTTACAGGAGATAGC
CAAAATAAGGCTGCACAATTGCAATTTAGAGGCAAGCGCATTTATGAGGCTGCAATGAAC
GAGTTTATGTCAAAAGGAATGCGATATGCCAAGCAGGCTCTTCTCTCTGGATGTTCTGCT
GGTGGTCTAGCTTCAATAATGCATTGTGATGACTTCCGCAATTTGCTCCCACATAGTACT
AAAGTGAAGTGCCTGAGTGATGCTGGATTATTTATGGACGCAGTTGATGTATCTGGAGGG
CGCTCCCTGAGAAATTTCTTTGGAGGTGTGGTTAAGTTACAGGGTCTTCATAAGACGCTA
CCAAGAACGTGCACCAACCACCTTGATGCAACCTCATGCTTCTTTCCAGAGAATTTAATC
AACAACATCAAGACCCCACTTTTCCTGCTGAATGCTGCCTATGATTCCTGGCAGCTTCAG
GAAAGTTTGGCTCCTCGGGGAGCTGATCCTCATGGCATATGGCACGATTGTACACTCAAT
AATGAAAGATGTTCTCCTTCTCAGATTCATTTTTTACAAGGTTTTAGGATTCATATGCTT
AATACAATTAAACGATTCGCTGCTTCAAGACAAAATGGTTTGTTTATAAACTCATGCTTT
GCCCACTGCCAATCTGAGAGGCAAGATACATGGTTTTCCGATAATTCTCCCATGATTAAT
AACAAGCCGATTGCACTTGCAGTTGGAGATTGGTACTTTGATCGATCAGGTATGAAGGCA
ATAGACTGTGCATATCCATGCGATAGAACATGTCACAACCTGATCTTTAGATGA

Peptide Sequence

PEP ID

XP_016481028.1
PEP Infomation

PREDICTED: pectin acetylesterase 12-like isoform X1 [Nicotiana tabacum]
Sequence

MAKVFMWFLGVIFVLSKLVDSYEFEEFFFNKTEGVFLESVYEAAAAGGPTPLMVGLTLIH
GAGARGAVCLDGTLPGYHIHRGYGSGANSWLVQLEGGGWCNNIRSCVYRKKTRRGSSNYM
EKQIPFTGILSNKAEENPDFYNWNRVKVRYCDGASFTGDSQNKAAQLQFRGKRIYEAAMN
EFMSKGMRYAKQALLSGCSAGGLASIMHCDDFRNLLPHSTKVKCLSDAGLFMDAVDVSGG
RSLRNFFGGVVKLQGLHKTLPRTCTNHLDATSCFFPENLINNIKTPLFLLNAAYDSWQLQ
ESLAPRGADPHGIWHDCTLNNERCSPSQIHFLQGFRIHMLNTIKRFAASRQNGLFINSCF
AHCQSERQDTWFSDNSPMINNKPIALAVGDWYFDRSGMKAIDCAYPCDRTCHNLIFR

Transcript Sequence

Gene sequence data has not been registered.